From computers to DNA programming

A programmable chemical oscillator made from DNA. Image credit: Ella Maru Studio and Cody Geary

We often refer to the DNA in our cells as the program, the code of life. Scientists are learning to exploit these characteristics of DNA and to alter them to create “new programs”, as an example to create bacteria that can dissolve an oil spill by digesting the oil decomposing it into degradable components.

Technologies like CRISPR/Cas 9 allow scientists to change the code in the DNA cutting and splicing codons to create desired proteins, reacting to specific conditions.

Now a team of researchers at Austin, University of Texas, have moved the first steps to program DNA molecules to create sophisticated molecular machines.

They observed that robots are artificial entities that can be programmed to execute a specific task. White blood cells, in a way, are also programmed to execute a specific task, like chasing a bacteria and killing it. White blood cells are a sort of “wet robots” and they act through chemical interactions. The researchers invented a molecular programming language and a molecular compiler to create a “molecular hardware”, a wet robot, that can execute specific actions. Take a look at the video clip. It explains really well what they have done.

To demonstrate the capability of programming the DNA the researchers created a chemical oscillator that can take decisions (it is called “rock-paper-scissor oscillator” because it mimics the kind of decisions taken in the game).

The short term goal is to be able to program the DNA to synthesise complex molecules able to detect complex signatures and take actions. The longer term is to apply these programs to fix a malfunctioning circuit in a cells.

About Roberto Saracco

Roberto Saracco fell in love with technology and its implications long time ago. His background is in math and computer science. Until April 2017 he led the EIT Digital Italian Node and then was head of the Industrial Doctoral School of EIT Digital up to September 2018. Previously, up to December 2011 he was the Director of the Telecom Italia Future Centre in Venice, looking at the interplay of technology evolution, economics and society. At the turn of the century he led a World Bank-Infodev project to stimulate entrepreneurship in Latin America. He is a senior member of IEEE where he leads the New Initiative Committee and co-chairs the Digital Reality Initiative. He is a member of the IEEE in 2050 Ad Hoc Committee. He teaches a Master course on Technology Forecasting and Market impact at the University of Trento. He has published over 100 papers in journals and magazines and 14 books.